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<div class='quotetop'>QUOTE(Scatty @ Jul 14 2006, 09:27 PM) [snapback]243337[/snapback]</div>

There's no problem with this patch. The books are always there, and you have to think twice before you find hints for the test in them, maybe you just overlooked them. Try searching at the second floor.
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I just finished the game, after playing it a second time, the books at the monastery of the theurgists suddenly were there. In my first play, they were not there so I guess that WAS a bug.